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By Stefano Lonardi, L. Ramsay, Steve Wanamaker, M. Roose, M. Moscou, Rajeev K. Varshney, P. Szűcs, G. Muehlbauer, J. Muehlbauer, J. Deyoung and 1 more. 2009

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Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach (2012, unknown): “A similar observation was made on SNPs developed from expressed sequence tags [26].”
Genomic Selection in Plant Breeding (2011, methodology): “, 2009), or by genotyping assays (Chao et al., 2009; Close et al., 2009).”
SNP Discovery through Next-Generation Sequencing and Its Applications (2012, background): “NGS-derived SNPs have been reported in humans [79], Drosophila [80], wheat [81, 82], eggplant [83], rice [84–86], Arabidopsis [87, 88], barley [14, 89], sorghum [90], cotton [91], common beans [78], soybean [92], potato [93], ﬂax [94], Aegilops tauschii [95], alfalfa [96], oat [97], and maize [98]…”
CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers (2015, methodology): “While the genomic location for the majority of these “objects” was unknown, we had 1,652 unigenes for which a location was derived from the Golden Gate oligonucleotide pool assay (OPA) [28], which allowed us to determine a presumed location of 2,252 BACs [25].”
Genome-wide association mapping of Fusarium head blight resistance in contemporary barley breeding germplasm (2011, background): “The mapped markers from BOPA1 have been shown to be of very high quality (Close et al. 2009).”