The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria.

By G. Nicol, S. Leininger, C. Schleper, J. Prosser. Environmental Microbiology, 2008

1,315 citations recorded by the source corpus.

Subfields: Ecology, Environmental Engineering, Pollution

View Paper: https://www.semanticscholar.org/paper/9ea7a1707f25c45efb81af99f8908ba5fcea214f

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Ecology

1. Noah Fierer
2. Rob Knight
3. C. Lauber
4. Ji‐Zheng He
5. J. Gregory Caporaso
6. Haiyan Chu
7. William Walters
8. J. Rousk

In Environmental Engineering

1. Ji‐Zheng He
2. Hangwei Hu
3. J. Prosser
4. Li‐Mei Zhang
5. N. Boon
6. W. Verstraete
7. G. Nicol
8. L. Wittebolle

In Pollution

1. Ji‐Zheng He
2. Hangwei Hu
3. Li‐Mei Zhang
4. J. Prosser
5. G. Nicol
6. Ju-Pei Shen
7. Z. Jia
8. Zhihong Xu

Citations in the corpus

• Effect of nitrification inhibitors on the growth and activity of Nitrosotalea devanaterra in culture and soil (2013, positive): “DGGE analysis was carried out as previously described (Nicol et al., 2008).”
• Responses of ammonia-oxidizing bacteria and archaea to nitrogen fertilization and precipitation increment in a typical temperate steppe in Inner Mongolia (2013, background): “, 2008), and dominate in abunance over their bacterial counterparts in multiple environments, articularly in soils (Leininger et al., 2006; Nicol et al., 2008; Zhang t al., 2010).”
• Ammonia-oxidizing archaea have more important role than ammonia-oxidizing bacteria in ammonia oxidation of strongly acidic soils (2011, background): “1b lineage (Nicol et al., 2008), which had been presumed to possess a heterotrophic or mixotrophic pathway of nitrification until the recent findings that group 1.”
• Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil. (2009, background): “Although the observation of archaeal amoA messenger RNA in soil indicates that amoA genes are transcribed (Treusch et al., 2005; Leininger et al., 2006; Chen et al., 2008; Nicol et al., 2008; Tourna et al., 2008), this does not necessarily mean that Archaea use ammonia oxidation as exclusive energy ”
• Abundance and community structure of ammonia-oxidizing bacteria and archaea in a temperate forest ecosystem under ten-years elevated CO2 (2012, background): “However, results of CCA in this study showed that only soil pH significantly influenced the composition of archaeal amoA genotype, which is consistent with the prior studies (He et al., 2007; Nicol et al., 2008).”
• Current insights into the autotrophic thaumarchaeal ammonia oxidation in acidic soils (2012, background): “5, with the ratio of AOA versus AOB transcriptional activity reaching the maximum value in the lowest pH soil (Nicol et al., 2008).”
• Culture-independent molecular techniques for soil microbial ecology (2010, background): “Examples include functional genes amoA e ammonia monooxygenase (Bernhard et al., 2005; Nicol et al., 2008; Principi et al., 2009); nirK, nirS e nitrite reductases (Sharma et al.”
• A review of soil NO transformation: associated processes and possible physiological significance on organisms (2015, background): “Considering these processes and 999 mechanisms, we hypothesize that not only nitrifying (AOB and AOA) 1000 microbes are responsible for soil NO production, but that also other 1001 microbes via the release of extracellular SOD (directly) or SOD (after cell 1002 damage) contribute to soil NO producti”