The rare bacterial biosphere.
By C. Pedrós-Alió. Annual Review of Marine Science, 2012
701 citations recorded by the source corpus.
Subfields: Ecology, Molecular Biology
View Paper: https://www.semanticscholar.org/paper/99ed0fab030dccb785e7b2eafc32958df2046a5b
How researchers see this paper
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In Ecology
- Noah Fierer
- Rob Knight
- J. Gregory Caporaso
- Jo Handelsman
- Josh D. Neufeld
- Jack A. Gilbert
- M. Lynch
- A. Shade
In Molecular Biology
- Noah Fierer
- Rob Knight
- J. Gregory Caporaso
- Jo Handelsman
- Josh D. Neufeld
- Jack A. Gilbert
- A. Shade
- M. Lynch
Citations in the corpus
- Basin scale variability of active diazotrophs and nitrogen fixation in the North Pacific, from the tropics to the subarctic Bering Sea (2017, methodology): “Abundant OTUs whose sequences occupied ≥1% of total nifH sequences [Pedrós-Alió, 2012] at each station were translated into amino acid sequences, and non-nifH OTUs or OTUs with frame shifts were removed.”
- Ecology and exploration of the rare biosphere (2015, methodology): “More recently, Hugoni et al. 81 monitored archaeal com munities in surface coastal waters and showed that sev eral taxa exhibited a cyclical abundance with occasional dominance, similar to temporal distributions observed at station L4 (REFS 69–71) .”
- Spatiotemporal distributions of rare bacterioplankton populations indicate adaptive strategies in the oligotrophic ocean (2013, background): “Pedrós-Alió (2012) speculated that rare taxa, represented by the long tails of rank abundance plots, represent seed banks that reproduce in response to favorable shifts in environmental conditions, and otherwise persist, aided by the advantage of diminished viral and zooplankton predation at low…”
- Microbial Surface Colonization and Biofilm Development in Marine Environments (2015, background): “It has been suggested that the proteorhodopsins and the light-sensing proteins may play a role in the dispersion of Bacteroidetes from particles (822, 823).”
- Conditionally Rare Taxa Disproportionately Contribute to Temporal Changes in Microbial Diversity (2014, background): “Some rare microorganisms are likely on their way to local extinction (8) or are transient taxa that are “passing through” an environment (10–13).”