Mapping of two networks of residues that exhibit structural and dynamical changes upon binding in a PDZ domain protein.

By Anne Dhulesia, J. Gsponer, Michele Vendruscolo. 2008

91 citations recorded by the source corpus.

Subfields: Ecology, Molecular Biology

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Ecology

1. Lucy J. Colwell
2. Sivaraman Balakrishnan

In Molecular Biology

1. Hetunandan Kamisetty
2. Sivaraman Balakrishnan
3. Lucy J. Colwell
4. Sergey Ovchinnikov
5. Jaime G. Carbonell
6. Tiberiu Teşileanu
7. Christopher James Langmead
8. Su-In Lee

Citations in the corpus

• Learning generative models for protein fold families (2011, background): “The domain, and its members have been studied extensively, in multiple studies, using a wide range of techniques ranging from computational approaches based on statistical coupling ([8]) and Molecular Dynamics simulations [25], to NMR based experimental studies ([26]).”
• Protein Sectors: Statistical Coupling Analysis versus Conservation (2014, background): “Alternatively, this kind of experiments could be done in silico using for example molecular dynamics simulations to identify correlated motions in the protein [29] (Olivier Rivoire, personal communication).”
• Finding and Leveraging Structure in Learning Problems (2012, background): “…studied extensively, in multiple studies, using a wide range of techniques ranging from computational approaches based on statistical coupling ([Lockless and Ranganathan, 1999]) and Molecular Dynamics simulations [Dhulesia et al., 2008], to NMR based experimental studies ([Fuentes et al., 2004]).”