Phylogenetic Revision of the Genus Peltigera (Lichen‐Forming Ascomycota) Based on Morphological, Chemical, and Large Subunit Nuclear Ribosomal DNA Data

By J. Miadlikowska, F. Lutzoni. INTERNATIONAL JOURNAL PLANT SCIENCES, 2000

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A molecular phylogeny of Graphidaceae (Ascomycota, Lecanoromycetes, Ostropales) including 428 species (2013, methodology): “After testing for supported topological conflicts (Mason-Gamer and Kellogg 1996, Miadlikowska and Lutzoni 2000, Kauff and Lutzoni 2002), the three genes were combined into a single supermatrix.”
Phylogeny of the Lobariaceae (lichenized Ascomycota: Peltigerales), with a reappraisal of the genus Lobariella (2013, methodology): “The separate gene trees were tested for supported topological conflicts (MasonGamer & Kellogg 1997; Miądlikowska & Lutzoni 2000; Kauff & Lutzoni 2002) and the three datasets were eventually combined into a single supermatrix of 2413 base lengths plus 50 PICS-Ord codes.”
The phylogeny of Arthoniales (Pezizomycotina) inferred from nucLSU and RPB2 sequences (2011, unknown): “2002) or LIC24R (Miadlikowska and Lutzoni 2000) with LR5 (Vilgalys and Hester 1990) or a fragment of about 1.”
Assessing host specialization in symbiotic cyanobacteria associated with four closely related species of the lichen fungus Peltigera (2005, background): “This was carried out at nested taxonomic scales: closely related species within the genus Peltigera section Peltigera sensu Miadlikowska & Lutzoni ( 2000 ), Peltigera versus other cyanolichen genera, and plants and other fungi versus lichenized fungi.”