Biophysics: Searching for Principles

By William Bialek. 2012

404 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/7619cd88ea6aa4a41171ca4ad27eec32f2709662

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Citations in the corpus

Colloquium: Criticality and dynamical scaling in living systems (2017, background): “…strategy consists in looking at complex biological problems from a global perspective, shifting the focus from specific details of the molecular machinery to integral aspects (Alon, 2006; Bialek, 2012; Goldenfeld and Woese, 2011; Hartwell et al., 1999; Kaneko, 2006; Sauer et al., 2007).”
Universal proximity effect in target search kinetics in the few-encounter limit (2016, background): “…asymptotics arise generically in the presence of an effective repulsion in the immediate vicinity of the target, a time-scale separation between direct and reflected indirect trajectories gives rise to a universal proximity effect : Direct paths, heading more or less straight from the point…”
Inferring interaction partners from protein sequences using mutual information (2018, background): “MI is the actual value of the mutual information and M̂I is its naive estimate using empirical 300 frequencies, while K is the number of independent values that can be taken by the pair of random 301 variables considered, and M represents dataset size [32].”
Nonequilibrium physics in biology (2019, background): “Information flow is important for cellular signal transduction, development, brain information processing (Barato et al., 2013; Barato and Seifert, 2014; Bialek, 2012; Levchenko and Nemenman, 2014).”
Channel Modeling for Diffusive Molecular Communication—A Tutorial Review (2018, methodology): “Remark 20: The choice of the Poisson distribution for the number of environmental noise molecules observed at the receiver, r int ( t, τ ) , can be further justiﬁed from an information-theoretic perspective [111].”