The Rebirth of Culture in Microbiology through the Example of Culturomics To Study Human Gut Microbiota

By J. Lagier, Perrine Hugon, S. Khelaifia, P. Fournier, B. La Scola, Didier Raoult. Clinical Microbiology Reviews, 2015

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Recent progress in biohydrometallurgy and microbial characterisation (2018, methodology): “These studies use systematic high-throughput culture-based approaches, now dubbed as "culturomics" (Cherif et al., 2015; Diop et al., 2016; Lagier et al., 2015).”
Resistance Mechanisms to Immune-Checkpoint Blockade in Cancer: Tumor-Intrinsic and -Extrinsic Factors. (2016, neutral): “…have been reported from metagenomics and metatranscriptomics analyses from MetaHIT and the Human Microbiome Project (Li et al., 2014; Nielsen et al., 2014), and ‘‘culturomics’’ has been coupled with MALDI-TOF mass spectrometry for the identification of new commensals (Lagier et al., 2015).”
Butyrate: A Double-Edged Sword for Health? (2018, background): “More than 50 genera and 400 species of bacteria have been found in human feces (18).”
Akkermansia muciniphila is a promising probiotic (2019, background): “It is widely distributed in the intestines of human and animals (Belzer and de Vos, 2012; Lagier et al., 2015).”
RETRACTED ARTICLE: Culture of previously uncultured members of the human gut microbiota by culturomics (2016, neutral): “The 18 best culture conditions were selected using liquid media enrichment in a medium containing blood and rumen ﬂ uid and subculturing aerobically and anaerobically in a solid medium (Supplementary Table 2b) 2 .”