A model of molecular interactions on short oligonucleotide microarrays

By Li Zhang, Michael F. Miles, Kenneth D. Aldape. Nature Biotechnology, 2003

309 citations recorded by the source corpus.

Subfields: Molecular Biology

View Paper: https://www.semanticscholar.org/paper/6e6da621f0200daa484c5b6ada9e3debf1c369af

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In Molecular Biology

1. Michael Boutros
2. George M. Church
3. Alan M. Michelson
4. Marc S. Halfon
5. Sung E. Choe
6. Eamonn J. Keogh
7. Chotirat (Ann) Ratanamahatana
8. Ziv Bar-Joseph

Citations in the corpus

• A Model-Based Background Adjustment for Oligonucleotide Expression Arrays (2004, unknown): “There have been attempts at using sequence information to predict non-specific binding (Zhang et al., 2003).”
• Stochastic Models Inspired by Hybridization Theory for Short Oligonucleotide Arrays (2004, unknown): “The weights ( ω k s) are estimated empirically (see Zhang et al. [2003] for more details).”
• Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset (2005, methodology): “In addition, we used the dChip [19], MAS 5.0 [12], Perfect Match [20,21] and SAM [27] executa-bles made available by the respective authors.”