Expansion and Contraction of the Chloroplast Inverted Repeat in Apiaceae Subfamily Apioideae

By G. Plunkett, S. R. Downie. 2000

125 citations recorded by the source corpus.

Subfields: Cell Biology, Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/6b7d7b2a196b83d8056af15ec9a5ce482e747c55

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Cell Biology

1. S. R. Downie
2. Amit Dhingra

In Molecular Biology

1. Pamela S. Soltis
2. D. Soltis
3. Michael J. Moore
4. D. Quandt
5. S. R. Downie
6. Matthew A. Gitzendanner
7. P. P. Lowry II
8. Jun Wen

In Plant Science

1. D. Soltis
2. Pamela S. Soltis
3. S. R. Downie
4. Robert K. Jansen
5. Jun Wen
6. Amit Dhingra
7. D. Quandt
8. G. Schneeweiss

Citations in the corpus

• The evolution of the plastid chromosome in land plants: gene content, gene order, gene function (2011, background): “evolution of land plants and often are specific for single orders and families, sometimes even for just one or a few species within a genus (Downie and Bewley 1992; Goulding et al. 1996; Plunkett and Downie 2000; Daniell et al. 2006; Guisinger et al. 2010; Wolf et al. 2010a).”
• Infrafamilial classifications and characters in Araliaceae: Insights from the phylogenetic analysis of nuclear (ITS) and plastid (trnL-trnF) sequence data (2004, background): “…based on many data sets have converged on a unified picture of evolutionary relationships that is at odds with all of the published infrafamilial systems for that family (e.g. Downie et al. 1996, 1998, 2001; Plunkett et al. 1996b; Katz-Downie et al. 1999; Plunkett and Downie 1999, 2000).”
• A Comparative Analysis of Whole Plastid Genomes from the Apiales: Expansion and Contraction of the Inverted Repeat, Mitochondrial to Plastid Transfer of DNA, and Identification of Highly Divergent Noncoding Regions (2015, background): “Coriandrum also has a ~5.7 kb insertion of unknown composition in the vicinity of the 16S rRNA gene near the terminus of the IR (Plunkett and Downie 2000), a region subsequently identified through entire plastome sequencing as a duplication of genes trnHGUG and psbA (Peery et al. 2006).”
• Phylogenetic Analysis of the Plastid Inverted Repeat for 244 Species: Insights into Deeper-Level Angiosperm Relationships from a Long, Slowly Evolving Sequence Region (2011, background): “…and contraction of the ends of the IR as well as pseudogenization of some genes (e.g., rpl23, ndhB, and ycf2) and occasional loss of introns (e.g., ndhB and rpl2 introns) in various taxa (Palmer 1991; Downie and Palmer 1992; Plunkett and Downie 2000; Raubeson and Jansen 2005; Wang et al. 2008).”