Minimal cut sets in biochemical reaction networks

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Structural and functional analysis of cellular networks with CellNetAnalyzer (2007, unknown): “The computation of MCSs has been revised; it relies now on the Berge algorithm known from the theory of minimal hitting sets [19,16] outper-forming the original algorithm introduced in [15] by about two orders of magnitudes.”
A methodology for the structural and functional analysis of signaling and regulatory networks (2006, background): “Recently, the concept of minimal cut sets has been introduced for identifying targets in metabolic networks [28,29].”
Genome-scale models of bacterial metabolism: reconstruction and applications (2008, methodology): “Given the combinatorial complexity of mixing several gene deletions, dedicated methods have been designed to analyze the effects of multiple deletions and applied to identify epistatic interactions between genes (Klamt & Gilles, 2004; Deutscher et al ., 2006, 2008; Imielinski & Belta, 2008).”
Structure and dynamics of molecular networks: A novel paradigm of drug discovery: A comprehensive review (2012, unknown): “…where kinetic parameters are known, while flux balance analysis (FBA), flux-variability analysis (FVA) and elementary flux mode analysis are very useful methods to characterize systems-level metabolic responses (Fell, 1998; Cascante et al., 2002; Klamt & Gilles, 2004; Chavali et al., 2012).”