The Archaea and the deeply branching and phototrophic bacteria

By D. Boone, R. Castenholz, George M. Garrity, J. T. Staley, D. H. Bergey. 2001

486 citations recorded by the source corpus.

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Citations in the corpus

Species concepts and speciation factors in cyanobacteria, with connection to the problems of diversity and classification (2015, background): “Five subgroups, corresponding to the orders Chroococcales, Pleurocapsales, Oscillatoriales, Nostocales, and Stigonematales, were classiﬁed with respect to the type of cell reproduction, cell differentiation, and molecular/ biochemical attributes (Rippka et al. 1979; Boone and Castenholz 2001).”
Archaeal diversity associated with in situ samplers deployed on hydrothermal vents on the East Pacific Rise (13°N) (2003, methodology): “…2001b), however, the observation of phylotypes related to the aerobic organism Aeropyrum pernix and the heterotrophic sulphur-reducer Thermodiscus maritimus is unusual as these hyperthermophiles have only been detected in shallow marine vents (Takai and Sako, 1999; Huber and Stetter, 2001b).”
Cyanobacterial evolution during the Precambrian (2016, background): “Cell widths within trichomes of cyanobacteria from subsection V vary greatly (Castenholz 2001) and are therefore not included in the size comparison.”
SILVA, RDP, Greengenes, NCBI and OTT — how do these taxonomies compare? (2017, methodology): “Taxonomic rank information for Archaea and Bacteria is obtained from Bergey’s Taxonomic Outlines [10–13] and from the List of Prokaryotic Names with Standing in Nomenclature (LPSN) [14], whereas eukaryotic taxonomy is based on the consensus views of the International Society of Pro-tistologists…”
25 years of serving the community with ribosomal RNA gene reference databases and tools. (2017, methodology): “The bacterial and archaeal classification in SILVA is based on Bergey’s Taxonomic Outlines (Boone et al., 2001; Brenner et al., 2005; Krieg et al., 2010; Vos et al., 2009).”
Cyanobacteria in Cold Ecosystems (2008, background): “ribulose 1,5-biphosphate carboxylase/oxygenase (RubisCO) (Castenholz 2001).”
Cyanobacterial peptides - nature's own combinatorial biosynthesis. (2006, background): “More than 80 structural archetypes of compounds have been defined, occurring in more than 30 genera of all five subsections (Boone & Castenholz, 2001) (corresponding to orders in other taxonomic schemes).”