Antibody structure, prediction and redesign.

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Protein 3D Structure Computed from Evolutionary Sequence Variation (2011, background): “quantify topographical differences in chain progression in 3D space, a direction for future work [64,65], together with an”
Conformations of the third hypervariable region in the VH domain of immunoglobulins. (1998, background): “(1996) and Morea et al. (1997) have stated rules for predicting torso conformation from the sequence of the H3 region.”
3D Protein Structure Predicted from Sequence (2011, unknown): “These classic structure comparison metrics need to be supplemented by more sophisticated measures, which quantify topographical differences in chain progression in 3D space, a direction for future work [62,63], toget”
Exploiting evolutionary relationships for predicting protein structures (2003, background): “…and a few other family-specific loops, such as antibody hypervariable loops (Al-Lazikani et al., 1997; Chothia and Lesk, 1987; Chothia et al., 1989; Morea et al., 1997, 1998b; Tramontano et al., 1990; Tramontano and Lesk, 1992), have been demonstrated to assume main-chain structures predictable…”
A new clustering of antibody CDR loop conformations (2010, unknown): “8) L1-16C 1 L1-16-1 2JELL(10) L1-17A 4 L1-17-1 1HILA 1BBDL(17) 1FRGL(12) 1MCPL(22) L2-7A 55 L2-8-1 1FGVL 1FLRL 1HILA 1IGML 1INDL 1MFAL + 38 more L2-8-2 2FBJL 1BAFL(12) 1GIGL(14) 1BBJL(25) L2-8-4 1IGCL 1RMFL(18) 1MCPL(19) 3HFML(28) L2-8-5 4BJLB(33; confE=10.”