GSDS 2.0: an upgraded gene feature visualization server

By B. Hu, Jinpu Jin, Anyuan Guo, He Zhang, Jingchu Luo, Ge Gao. Bioinform., 2014

3,641 citations recorded by the source corpus.

Summary: Visualizing genes’ structure and annotated features helps biologists to investigate their function and evolution intuitively. The Gene Structure Display Server (GSDS) has been widely used by more than 60 000 users since its first publication in 2007. Here, we reported the upgraded GSDS 2.0 with a newly designed interface, supports for more types of annotation features and formats, as well as an integrated visual editor for editing the generated figure. Moreover, a user-specified phylogenetic tree can be added to facilitate further evolutionary analysis. The full source code is also available for downloading. Availability and implementation: Web server and source code are freely available at http://gsds.cbi.pku.edu.cn. Contact: gaog@mail.cbi.pku.edu.cn or gsds@mail.cbi.pku.edu.cn Supplementary information: Supplementary data are available at Bioinformatics online.

Subfields: Molecular Biology

View Paper: https://www.semanticscholar.org/paper/5d0e28c5a5cfe9820802ab6ec3c49f6927555af9

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In Molecular Biology

1. Margaret H. Frank
2. Rui Xia
3. Chengjie Chen
4. Hao Chen
5. Yi Zhang
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7. Yehua He

Citations in the corpus

• TBtools - an integrative toolkit developed for interactive analyses of big biological data. (2020, background): “Tools such as GSDS2 (Hu et al., 2015) and FancyGenes (Rambaldi and Ciccarelli, 2009) have been designed to show gene structures; however, there is no single tool that is capable of simultaneously showing all of these features in a collective way.”