Fitting molecular fragments into electron density
By Kevin Cowtan. 2007
187 citations recorded by the source corpus.
A number of techniques for the location of small and medium-sized model fragments in experimentally phased electron-density maps are explored. The application of one of these techniques to automated model building is discussed.
Subfields: Materials Chemistry, Molecular Biology, Spectroscopy
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Materials Chemistry
- Randy J. Read
- A. McCoy
- G. Murshudov
- Martyn D. Winn
- Paul D. Adams
- Ronan M. Keegan
- Tom Burnley
- G. Bunkoczi
In Molecular Biology
- Randy J. Read
- A. McCoy
- Martyn D. Winn
- G. Murshudov
- Tom Burnley
- Ronan M. Keegan
- Kevin Cowtan
- A. Vagin
In Spectroscopy
- A. McCoy
- Randy J. Read
- Tom Burnley
- Martyn D. Winn
- S. W. Hoh
- Ronan M. Keegan
- G. Murshudov
- G. Polidori
Citations in the corpus
- Overview of the CCP4 suite and current developments (2011, methodology): “The CCP4 suite includes an interface for alternating cycles of model building with Buccaneer with cycles of model refinement with REFMAC5.”
- Current approaches for automated model building into cryo-EM maps using Buccaneer with CCP-EM (2020, methodology): “…of high resolution (<4 Å), has motivated the modification of existing and the development of new model-building tools to interpret cryo-EM maps (Cowtan, 2008; Baker et al., 2012; Brown et al., 2015; Wang et al., 2015; Chen et al., 2016; Zhou et al., 2017; Terwilliger, Adams et al., 2018;…”
- Crystal structure determination and refinement via SIR2014 (2015, methodology): “An automated model building (AMB) program [i.e. ARP/wARP (Perrakis et al., 1999; Langer et al., 2008), Buccaneer (Cowtan, 2006, 2008), Nautilus (Cowtan, 2012), a specific tool for nucleic acid model building, or PHENIX Autobuild (Terwilliger et al., 2008; Adams et al., 2010)] may be applied, to chec”