Bayesian probabilistic approach for predicting backbone structures in terms of protein blocks

By A. D. Brevern, Catherine Etchebest, S. Hazout. Proteins: Structure, Function, and Bioinformatics, 2000

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Local Protein Structures (2007, background): “60 [285, 352] have proved their efficiency both in the description and the prediction of small loops [99, 283, 362, 363] or long fragments [349, 364-368].”
Fast and accurate protein structure search with Foldseek (2022, background): “Most, such as CLE, 3D-BLAST and Protein Blocks, discretize the conformations of short stretches of usually 3–5 C α atoms 17–19 .”
p-Adic mathematical physics: the first 30 years (2017, methodology): “In [183] this approach was generalized as a model which unifies the fragment approach to proteins (construction of protein conformations as sequences of conformations of short fragments, see [305, 225, 226]) and the method of statistical potentials.”