ScanProsite: a reference implementation of a PROSITE scanning tool.

462 citations recorded by the source corpus.

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

Rules for nuclear localization sequence recognition by karyopherin beta 2. (2006, unknown): “Bioinformatics Search for New Kapβ2 Substrates Candidate Kapβ2 substrates were identified by the program ScanProsite (Gattiker et al., 2002) using motifs ϕ1-G/A/S-ϕ3-ϕ4-X7–12-”
UniProtKB/Swiss-Prot, the Manually Annotated Section of the UniProt KnowledgeBase: How to Use the Entry View. (2016, methodology): “This view gives also links to various analysis tools to be applied on the corresponding sequence such as BLAST and ScanProsite (see Fig.”
ScanProsite: detection of PROSITE signature matches and ProRule-associated functional and structural residues in proteins (2006, methodology): “For analyses where no pre-computed results are available (e.g. on user sequences, user patterns or ‘unspeciﬁc’ signatures) a real-time sequence analysis is performed using the ps_scan program (10).”
ExPASy: the proteomics server for in-depth protein knowledge and analysis (2003, background): “ScanProsite (13) scans a sequence against all the patterns, profiles and rules in PROSITE or scans a pattern, profile or rule against all sequences in SWISS-PROT, TrEMBL and/or PDB.”
Recent improvements to the PROSITE database (2004, methodology): “The ps_scan program, the reference tool to scan PROSITE (6), is able to highlight these positions in a matched region.”