Similarity Analysis of DNAs

By J. Johnson, William B. Whitman. 2007

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Quantification of indole-3-acetic acid from plant associated Bacillus spp. and their phytostimulatory effect on Vigna radiata (L.) (2009, methodology): “Amplification of 16S rDNA was performed as described earlier (Ali and Hasnain 2007a) using forward primer 27f (50-AGAGTTTGATC CTGGCTCAG-30) and reverse primer 1522r (50-AAGGAG GTGATCCA(AG)CCGCA-30) (Johnson 1994).”
Notes on the characterization of prokaryote strains for taxonomic purposes. (2010, methodology): “Although thermal stability of the native DNA and caesium chloride density-gradient centrifugation are alternative methods, these are now largely of historical interest (see Johnson & Whitman, 2007; De Ley, 1970).”
Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison (2010, background): “Accordingly, there may be inherent difficulties in obtaining a perfect correspondence between GGD and DDH because of the imprecision of the latter [8,9].”