R/qtl: high-throughput multiple QTL mapping

Bioinform., 2010

365 citations recorded by the source corpus.

Subfields: Genetics

View Paper: https://www.semanticscholar.org/paper/52628d78f508d7844fc236f749ce2ffe62c6b015

Citations in the corpus

• Comprehending crystalline β-carotene accumulation by comparing engineered cell models and the natural carotenoid-rich system of citrus (2011, neutral): “Samples were dried for 2–3 d at 80 (cid:31) C, and 100–200 mg portions were then wet-ashed with 4 ml of 4.4 M HNO 3 and 6.5 M H 2 O 2 for 30 min at 220 (cid:31) C using a MarsXpress oven (CEM, http://www.cem.com/).”
• ALLMAPS: robust scaffold ordering based on multiple maps (2015, positive): “Based on a back-cross model [15], two genetic maps were constructed from each of the subgroups using R/QTL [17], that we called BCMale and BCFemale.”
• R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multiparent Populations (2018, neutral): “R/qtl1 includes a quite comprehensive set of QTL mapping methods, including multiple-QTL exploration and model selection (Broman and Speed 2002; Manichaikul et al. 2009; Arends et al. 2010), as well as extensive visualization and data diagnostics tools (Broman and Sen 2009).”
• Marker-Assisted Plant Breeding: Principles and Practices (2015, neutral): “Its updated version (Arends et al. 2010) performs SMA, SIM, regression interval mapping, CIM, and MQM.”