High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice

By Adrienne E. Dorr, Jason P. Lerch, S. Spring, N. Kabani, R. Henkelman. NeuroImage, 2008

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Bioimage informatics: a new area of engineering biology (2008, methodology): “Bioimage informatics methods were used to study widely used model organisms, such as mouse (Dorr et al., 2008; Lein et al., 2007; Ng et al., 2007), fruit fly (Luengo Hendriks et al., 2006, Peng and Myers, 2004; H. Peng et al., unpublished data), Caenorhabditiselegans (Liu et al., 2008; Long et al.,…”
Maze training in mice induces MRI-detectable brain shape changes specific to the type of learning (2011, methodology): “In addition, an anatomical atlas labelled with 62 distinct structures (Dorr et al., 2008) was used to compute volumes of each structure for each mouse.”
Performing Label-Fusion-Based Segmentation Using Multiple Automatically Generated Templates (2012, methodology): “The specimen preparation for postmortem sample preparation has been described elsewhere [Dorr et al., 2008; Lerch et al., 2011b].”