Soil fungal community structure along a soil health gradient in pea fields examined using deep amplicon sequencing

By Lihui Xu, S. Ravnskov, J. Larsen, R. Nilsson, M. Nicolaisen. 2012

196 citations recorded by the source corpus.

View Paper: https://www.semanticscholar.org/paper/4ee0e0e8020f6d7077bc93fc23d8b00736a88ae8

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In Cell Biology

Baodong Chen

In Plant Science

Citations in the corpus

Culture-independent molecular tools for soil and rhizosphere microbiology (2013, background): “These soil attributes are relatively easy to measure and have been widely associated with “soil health” [186,187].”
Current overview on the study of bacteria in the rhizosphere by modern molecular techniques: a mini‒review (2015, background): “, 2013), 145 to 200 of fungal OTUs (Xu et al., 2012), and 300 archaea OTUs (Pires et al.”
Biogeographic patterns of microbial association networks in paddy soil within Eastern China (2020, background): “In contrast, it has been shown that Podospora, a fungal network hub, is one of the most abundant genera in healthy soils (Xu et al., 2012) and can control Verticillium wilt of tomato (Dutta, 1981).”
Effects of straw amendment and moisture on microbial communities in Chinese fluvo-aquic soil (2014, methodology): “18S rRNA genes are known to be too conserved to provide good separation of fungal taxa, and fungal-specific taxa should use the primers of ITS region of rRNA genes (e.g., Blaalid et al. 2012; Xu et al. 2012; Clemmensen et al. 2013).”
The legacy effect of cover crops on soil fungal populations in a cereal rotation (2016, background): “Our data related to bulk soil and it is likely analysis of fungi inside roots would yield stronger correlations since it is at the surface and within internal tissues of roots that antagonism between pathogens and mycorrhizal fungi would be focused (Xu et al., 2012a; Penton et al., 2014).”
Comparison on the structure and function of the rhizosphere microbial community between healthy and root-rot Panax notoginseng (2016, background): “Nineteen P. notoginseng plantations were selected of which incidence of root-rot disease ranged from 5% to 70% that was calculated based on observation of typical root-rot symptoms (Xu et al., 2012).”
Root Rot Diseases in Plants: A Review of Common Causal Agents and Management Strategies (2017, background): “Economically important hosts are tobacco [87], carrot [88], cotton [89], and soybean [90].”
Illumina metabarcoding of a soil fungal community (2013, background): “…produces longer reads, most 454 ITS studies use either ITS1 or ITS2 (examples relying on ITS1: Buée et al., 2009; Jumpponen and Jones, 2009; Jumpponen et al., 2010; Cordier et al., 2012; Danielsen et al., 2012; Xu et al., 2012; Yu et al., 2012; Zimmerman and Vitousek, 2012; Bálint et al., 2013).”