SoyBase, the USDA-ARS soybean genetics and genomics database
By D. Grant, Rex T. Nelson, Steven B. Cannon, Randy C. Shoemaker. Nucleic Acids Res., 2009
588 citations recorded by the source corpus.
SoyBase, the USDA-ARS soybean genetic database, is a comprehensive repository for professionally curated genetics, genomics and related data resources for soybean. SoyBase contains the most current genetic, physical and genomic sequence maps integrated with qualitative and quantitative traits. The quantitative trait loci (QTL) represent more than 18 years of QTL mapping of more than 90 unique traits. SoyBase also contains the well-annotated ‘Williams 82’ genomic sequence and associated data mining tools. The genetic and sequence views of the soybean chromosomes and the extensive data on traits and phenotypes are extensively interlinked. This allows entry to the database using almost any kind of available information, such as genetic map symbols, soybean gene names or phenotypic traits. SoyBase is the repository for controlled vocabularies for soybean growth, development and trait terms, which are also linked to the more general plant ontologies. SoyBase can be accessed at http://soybase.org.
Subfields: Molecular Biology, Plant Science
View Paper: https://www.semanticscholar.org/paper/482e730d0cbfe3fda47fdeedeeea221b2fbe353f
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In Plant Science
Citations in the corpus
- Next-generation phenotyping: requirements and strategies for enhancing our understanding of genotype–phenotype relationships and its relevance to crop improvement (2013, background): “There are many public databases that have been working to organize and collate plant phenotype data (Lai et al. 2012; Table 3), but most only have the current capacity to present free-text phenotypic descriptions of mutants, e.g. SoyBase (Grant et al. 2010) and MaizeGDB (Schaeffer et al. 2011).”