Proteomics: the first decade and beyond

By Scott Patterson, R. Aebersold. Nature Genetics, 2003

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Living Multiples: How Large-scale Scientific Data-mining Pursues Identity and Differences (2013, background): “In 1993 and 1994, a cluster of seven scientiﬁc papers published algorithms that could relate mass spectra with known molecules in reference databases (Patterson and Aebersold, 2003).”
The Proteomics Protocols Handbook (2005, background): “A critical one is the extraction and solubilization of all components, regardless of whether a chromatographic (1,2) or two-dimensional (2-D) gel electrophoretic fractionation (3–6) is performed prior to analysis of proteins of interest by mass spectrometry of protein digests.”
Processing methods for differential analysis of LC/MS profile data (2005, methodology): “Liquid chromatography coupled to mass spectrometry [1,2] (LC/MS) has been widely used in proteomics [3] and metabolomics [4] research.”
A common open representation of mass spectrometry data and its application to proteomics research (2004, neutral): “dtd" [ ]> Proteomics research is supported by many different types of mass spectrometers, which differ in the manner in which data are acquired and store”