mmod: an R library for the calculation of population differentiation statistics

By David J. Winter. Molecular Ecology Resources, 2012

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dartr: An r package to facilitate analysis of SNP data generated from reduced representation genome sequencing (2018, methodology): “For example, the package POPGENREPORT (Adamack & Gruber, 2014) calculates landscape resistance matrices and conducts isolation – by-distance analysis based on genind objects, and the package MMOD (Winter, 2012) calculates a variety of genetic distance metrics also based on the genind format.”
diveRsity: An R package for the estimation and exploration of population genetics parameters and their associated errors (2013, background): “, 2010), SMOGD (Crawford, 2010), mmod (Winter, 2012), 158”
Maintaining tiger connectivity and minimizing extinction into the next century: Insights from landscape genetics and spatially-explicit simulations (2017, methodology): “We then calculated heterozygosity based differentiation statistics (PopGenReport 144 (Adamack & Gruber 2014), MMOD (Winter 2012), and HIERFSTAT (Goudet 2005) in R (Ihaka & 145 Gentleman 2012)).”
PopGenReport: simplifying basic population genetic analyses in R (2014, methodology): “The genind data class has been adopted by several recently released packages including PEGAS (Paradis 2010), and MMOD (Winter 2012).”