Improving phylogenetic inference of mushrooms with RPB1 and RPB2 nucleotide sequences (Inocybe; Agaricales).
By P. B. Matheny. Molecular Phylogenetics and Evolution, 2005
621 citations recorded by the source corpus.
Subfields: Ecology, Evolution, Behavior and Systematics, Pharmacology, Plant Science
View Paper: https://www.semanticscholar.org/paper/3d201922760bc5f973f5f869612dda6bc0ac9b76
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In Ecology, Evolution, Behavior and Systematics
In Pharmacology
In Plant Science
Citations in the corpus
- Resolving the phylogenetic position of the Wallemiomycetes: an enigmatic major lineage of Basidiomycota (2006, background): “Several species-level studies of Basidiomycota that entail multiple gene comparisons (Matheny et al. 2002; Aime and PhillipsMora 2005; Frøslev et al. 2005; Matheny 2005) depict no, or rare, instances of strongly supported gene conflict.”
- Phylogenetic classification of Trametes (Basidiomycota, Polyporales) based on a five–marker dataset (2011, methodology): “1R (Liu & al., 1999; Matheny, 2005) and RPB2-6.”
- Out of the Palaeotropics? Historical biogeography and diversification of the cosmopolitan ectomycorrhizal mushroom family Inocybaceae (2009, methodology): “DNA extraction, PCR, sequencing and nucleotide alignments Protocols for DNA extraction, polymerase chain reaction (PCR), sequencing and nucleotide alignments follow those of Matheny et al. (2002) and Matheny (2005).”
- Fungal diversity notes 491–602: taxonomic and phylogenetic contributions to fungal taxa (2017, background): “Several species are devoid of metuloidal cystidia and they are characterised by abundant, thin-walled cheilocystidia (Matheny 2005; Larsson et al. 2009).”
- Phylogeny, divergence time estimation, and biogeography of the genus Heterobasidion (Basidiomycota, Russulales) (2015, background): “2012 ) , mushrooms ( Matheny 2005 ) , and ascomycetes ( Du et al .”
- Impact of DNA sequence-data on the taxonomy of anamorphic fungi (2007, background): “19 o Chalara ......................................................................................................... 19 o Phialophora .................................................................................................. 19 o Diplococcium-Spadicoides ...................................”
- Major clades of Agaricales: a multilocus phylogenetic overview (2006, methodology): “The bulk of the remaining 24% of sequences was presented previously in Aime and PhillipsMora (2005), Binder et al (2005, 2006), Binder and Hibbett (2002), Matheny (2005) and Moncalvo et al (2000, 2002).”
- Notes, outline and divergence times of Basidiomycota (2019, background): “…worldwide, see Kirk et al. 2013 (genus accepted), sequence data available, see Moncalvo et al. 2002 (phylogeny), Gulden et al. 2005 (phylogeny), Matheny 2005 (phylogeny), Garnica et al. 2007 (agarics, phylogeny, basidiospore ultrastructure), Matheny et al. 2015 (phylogeny, clustering into…”
- Walking the thin line between Russula and Lactarius: the dilemma of Russula subsect. Ochricompactae. (2008, methodology): “…large subunit (nucLSU) using primers LR0R - LR7 (or LR5) (Vilgalys and Hester, 1990; http://www.biology.duke.edu/fungi/mycolab/pr imers.htm), and part of the second largest subunit of the RNA polymerase II (RPB2, region 6-7) using primer bRPB2 6f - fRPB2 7cr (Liu et al., 1999; Matheny, 2005).”
- Taxonomy and phylogeny of the brown-rot fungi: Fomitopsis and its related genera (2016, methodology): “Part of tef1 was amplified with primer pairs EF1-983 F and EF1-1567R (Rehner 2001). rpb2 was amplified with primer pairs bRPB2-6 F and bRPB2-7R (Matheny 2005).”