Discovery of meaningful associations in genomic data using partial correlation coefficients
By A. G. de la Fuente, Nan Bing, Ina Hoeschele, Pedro Mendes. Bioinform., 2004
582 citations recorded by the source corpus.
Subfields: Genetics, Molecular Biology
View Paper: https://www.semanticscholar.org/paper/36ba289e797e2b6bd74426b93d51cc824981f080
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In Molecular Biology
- Wenxu Wang
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- Celso Grebogi
- Steven L. Brunton
- J. Nathan Kutz
- Joshua L. Proctor
- Maizar Raissi
Citations in the corpus
- Data Based Identification and Prediction of Nonlinear and Complex Dynamical Systems (2016, methodology): “Partial correlation and information theory (PCIT) [304,305] extract all possible interaction triangles and apply Data Processing Inequality (DPI) to filter indirect interactions.”
- Benchmarking algorithms for gene regulatory network inference from single-cell transcriptomic data (2019, methodology): “There is a history of GRN inference algorithms that explicitly try to avoid indirect effects, using techniques such as partial correlation coefficients [37], the data processing inequality [33, 38], and conditioning the score of a pair of genes on all other genes [12].”
- Statistical Applications in Genetics and Molecular Biology A Shrinkage Approach to Large-Scale Covariance Matrix Estimation and Implications for Functional Genomics (2011, unknown): “In this context it is also interesting to note that the difficulty of obtaining reliable estimates of˜P has led some researchers to instead consider partial correlations of limited order (e.g., de la Fuente et al., 2004; Wille et al., 2004; Magwene and Kim, 2004).”