Modelling the Differential Pressure at Sieves with Artificial Neural Networks (Multilayer Perceptron) - a Contribution to Reactor Safety Research

By A. Kratzsch, W. Kästner, R. Hampel. EUSFLAT Conf., 2007

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Algebraic Statistics for Computational Biology: Preface (2005, methodology): “There are many variants of BLAST that have been designed for specialized tasks, including BLASTZ [Schwartz et al., 2003] for rapid local alignment or large genomic regions and BLAT [Kent, 2002] for fast mRNA/DNA alignments.”
Engineering a software tool for gene structure prediction in higher organisms (2005, methodology): “Other recent programs with similar capabilities are GMAP [23], Genomewise [5] BLAT [13], Spidey [21], and sim4 [10].”
The physics of epigenetics (2015, background): “Structural effects of H4K16 acetylation on chromatin compaction are also confirmed by the observation of a weakening of chromatin packing in vivo (Shahbazian and Grunstein, 2007) and are in general associated with actively transcribed genes (Taylor et al., 2013).”
SweeD: Likelihood-Based Detection of Selective Sweeps in Thousands of Genomes (2013, methodology): “established the SFS within the coalescent framework, and Živković and Stephan (2011) found an equivalent solution based on diffusion theory (Evans et al. 2007) as”