Thirty years of environmental health research--and growing.

By Markus Wiederstein, Manfred J. Sippl. 1996

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How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

1. Ben M. Webb
2. Marco Biasini
3. Pascal Benkert
4. L. Tavares
5. Andrej Sali
6. Carolina S. Silva
7. V. C. de Souza
8. V. L. da Silva

Citations in the corpus

• Toward the estimation of the absolute quality of individual protein structure models (2010, background): “The performance of QMEAN with respect to other stateof-the-art methods such as ProSA (Sippl, 1993) and DFIRE (Zhou and Zhou, 2002) has also been recently assessed in an independent study (Rykunov and Fiser, 2010).”
• Comparative Protein Structure Modeling Using Modeller (2006, methodology): “They include VERIFY3D (Luthy et al., 1992), Prosa2003 (Sippl, 1993; Wiederstein and Sippl, 2007), HARMONY (Topham et al., 1994), ANOLEA (Melo and Feytmans, 1998), DFIRE (Zhou and Zhou, 2002), DOPE (Shen and Sali, 2006), SOAP (Dong et al., 2013), QMEAN local (Benkert et al., 2011), and TSVMod…”
• In silico SARS-CoV-2 vaccine development for Omicron strain using reverse vaccinology (2022, methodology): “ 1993; Wiederstein and Sippl 2007).”
• Comparative Protein Structure Modeling Using MODELLER (2016, background): “They include VERIFY3D (Luthy et al., 1992), Prosa, 2003 (Sippl, 1993; Wiederstein and Sippl, 2007), HARMONY (Topham et al., 1994), ANOLEA (Melo and Feytmans, 1998), DFIRE (Zhou and Zhou, 2002), DOPE (Shen and Sali, 2006), SOAP (Dong et al., 2013), QMEAN local (Benkert et al., 2011), and TSVMod…”
• A Hemagglutinin Stem Vaccine Designed Rationally by AlphaFold2 Confers Broad Protection against Influenza B Infection (2022, methodology): “Next, ProSA-web was applied in the refinement and validation of experimental protein structures and in structural prediction, based on measuring the deviation of the total energy of the structure with respect to an energy distribution derived from random conformations [15].”
• Strategies and molecular tools to fight antimicrobial resistance: resistome, transcriptome, and antimicrobial peptides (2013, methodology): “…Molprobity (Chen et al., 2009), both for quality analysis stereochemistry; Whatchek (Hooft et al., 1996) and Qmean (Benkert et al., 2009) used to evaluate the quality of the model, and the ProsaWeb (Wiederstein and Sippl, 2007) used in the analysis of interaction energy between the model residuals.”
• Protein Modelling: What Happened to the “Protein Structure Gap”? (2013, unknown): “…correctness (Chen et al., 2010; Hooft et al., 1996; Laskowski et al., 1993) or apply a combination of knowledge-based statistical measures derived from high-resolution crystals structures to provide estimates of model accuracy (Benkert et al., 2011; Ray et al., 2012; Wiederstein and Sippl, 2007).”