WebSat ‐ A web software for microsatellite marker development
By W. Martins, Divino César Soares Lucas, Kelligton Fabricio de Souza Neves, D. Bertioli. Bioinformation, 2009
313 citations recorded by the source corpus.
Simple sequence repeats (SSR), also known as microsatellites, have been extensively used as molecular markers due to their abundance and high degree of polymorphism. We have developed a simple to use web software, called WebSat, for microsatellite molecular marker prediction and development. WebSat is accessible through the Internet, requiring no program installation. Although a web solution, it makes use of Ajax techniques, providing a rich, responsive user interface. WebSat allows the submission of sequences, visualization of microsatellites and the design of primers suitable for their amplification. The program allows full control of parameters and the easy export of the resulting data, thus facilitating the development of microsatellite markers. Availability The web tool may be accessed at http://purl.oclc.org/NET/websat/
Subfields: Organic Chemistry, Plant Science
View Paper: https://www.semanticscholar.org/paper/297afbf1da2aee884715c9fa3ff0a353c977ba6a
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Plant Science
Citations in the corpus
- Complete plastid genome sequence of Vaccinium macrocarpon: structure, gene content, and rearrangements revealed by next generation sequencing (2013, methodology): “Simple sequence repeats (SSRs) were identified using WebSat web software (Martins et al. 2009) with thresholds of at least ten repeat units for mononucleotides, five for dinucleotides, four for trinucleotides, and three for tetra-, penta- and hexanucleotides.”