HIV-1 Nomenclature Proposal
By David L. Robertson, J. Anderson, J. Bradac, J. Carr, B. Foley, R. Funkhouser, F. Gao, Beatrice H. Hahn, M. Kalish, C. Kuiken and 10 more. Science, 2000
1,029 citations recorded by the source corpus.
Subfields: Infectious Diseases, Virology
View Paper: https://www.semanticscholar.org/paper/25e27805d2c0e031dd48fb8d06cfb90623e1fb2f
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Citations in the corpus
- COMET: adaptive context-based modeling for ultrafast HIV-1 subtype identification (2014, methodology): “Synthetic sequences were created from the full length HIV1 sequences in the LANL subtype reference alignment (1), including all recorded CRFs, after excluding nonM sequences, i.”
- Global and regional distribution of HIV-1 genetic subtypes and recombinants in 2004 (2006, background): “Recombinant viruses identified in at least three epidemiologically unlinked individuals and characterized by full-length genome sequencing are designated as circulating recombinant forms (CRFs) [4].”
- Comprehensive Cross-Clade Neutralization Analysis of a Panel of Anti-Human Immunodeficiency Virus Type 1 Monoclonal Antibodies (2004, background): “The two most common of these are CRF01 (AE), discovered in Thailand, which was initially classified as clade E, though later it was found to be clade E only in Env and clade A in other parts of the genome, and CRF02, an AG recombinant form common in Western Africa (122).”
- Global trends in molecular epidemiology of HIV-1 during 2000–2007 (2011, background): “gov)] if fully sequenced and found in three or more epidemiologically unlinked individuals, and unique recombinant forms (URFs) if not meeting these criteria [4].”
- Automated subtyping of HIV-1 genetic sequences for clinical and surveillance purposes: performance evaluation of the new REGA version 3 and seven other tools. (2013, methodology): “H, J, K (Robertson et al., 2000) and 58 Circulating Recombinant Forms (CRFs) (http://www.hiv.lanl.gov/; accessed March 2013) have been identified.”