BioAmbients: an abstraction for biological compartments
By Aviv Regev, Ekaterina M. Panina, William Silverman, Luca Cardelli, Ehud Y. Shapiro. Theoretical Computer Science, 2004
548 citations recorded by the source corpus.
Subfields: Computational Theory and Mathematics, Molecular Biology
View Paper: https://www.semanticscholar.org/paper/1cba7044f8a7b424f98dc46fbfda3e262bad728b
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Computational Theory and Mathematics
- Jane Hillston
- Cosimo Laneve
- Federica Ciocchetta
- Vincent Danos
- Ian David Bede Stark
- Marek Kwiatkowski
In Molecular Biology
- Jane Hillston
- Cosimo Laneve
- Federica Ciocchetta
- Vincent Danos
- Ian David Bede Stark
- Marek Kwiatkowski
Citations in the corpus
- Formal molecular biology (2004, background): “…reversible CCS [6] giving means to directly express reversibility, stochastic -calculus [22] [23] equipped with a quantitative contextual semantics and therefore giving access to simulations, bio-ambients and membrane-calculi [3] [24] for dealing with the dynamics of various cellular compartments.”
- Executable cell biology (2007, unknown): “Many other studies have followed this direction, including experiments using the ambient calculus 58 and the brane calculus 59 .”
- Bio-PEPA: A framework for the modelling and analysis of biological systems (2009, background): “In recent years there has been increasing interest in the application of process algebras in the modelling and analysis of biological systems [50,26,31,49,16,45,11].”
- The Continuous pi-Calculus: A Process Algebra for Biochemical Modelling (2008, background): “This led, for example, to the development of the biochemical stochastic π-calculus [1] and BioAmbients [14].”
- Rule-Based Modelling of Cellular Signalling (2007, unknown): “Since then, numerous variants of representations emphasizing different types of biological processes have been put forward [19,24,25,26,27].”