Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea

By P. Lam, M. Jensen, G. Lavik, D. McGinnis, B. Müller, C. Schubert, R. Amann, B. Thamdrup, M. Kuypers. Proceedings of the National Academy of Sciences of the United States of America, 2007

596 citations recorded by the source corpus.

Subfields: Ecology, Molecular Biology, Pollution

View Paper: https://www.semanticscholar.org/paper/1c049babedb6ecaa9406f863972db1a8f7295cda

How researchers see this paper

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In Ecology

1. Ji‐Zheng He
2. Li‐Mei Zhang
3. Hongyue Dang
4. C. R. Lovell
5. L. Riemann
6. S. Sievert
7. Michael Hügler
8. R. Conrad

In Molecular Biology

1. Ji‐Zheng He
2. Li‐Mei Zhang
3. R. Conrad
4. Ju-Pei Shen
5. C. R. Lovell
6. Shan Huang
7. R. Amann
8. P. Jaffé

In Pollution

1. Ji‐Zheng He
2. Li‐Mei Zhang
3. M. Kuypers
4. S. Sievert
5. Michael Hügler
6. J. Kuenen
7. Ju-Pei Shen
8. C. R. Lovell

Citations in the corpus

• Nitrogen removal pathways in a tidal flow constructed wetland under flooded time constraints (2015, unknown): “Although anammox could remove NO3 –N when NO3 –N was converted to NO2 –N by narG/ napA, some research has also demonstrated that aerobic ammonium oxidation, rather than nitrate reduction, provides a direct local source of nitrite for anammox in the suboxic zone (Lam et al., 2007; Wang et al., 2012).”
• Microbial Surface Colonization and Biofilm Development in Marine Environments (2015, background): “It has long been recognized that deep ocean waters maintain high levels of nitrate, presumably produced by decomposition and nitrification (207).”
• Major gradients in putatively nitrifying and non-nitrifying Archaea in the deep North Atlantic (2009, unknown): “Overall, marine Crenarchaeota seem to be particularly associated with the oxygen minimum zone 4,5,11,22 .”
• Beyond the Calvin cycle: autotrophic carbon fixation in the ocean. (2011, background): “Although these organisms compete for the ammonium, their metabolic activity could lower the oxygen concentration in the immediate vicinity of the anammox cells (Lam et al. 2007).”
• Characterization of incubation experiments and development of an enrichment culture capable of ammonium oxidation under iron-reducing conditions (2014, background): “Although nitrification might happen in suboxic environments (oxygen 5 µM, Lam et al., 2007), NH+4 oxidation in the presence of C2H2 has never been reported.”
• Bacteria rather than Archaea dominate microbial ammonia oxidation in an agricultural soil. (2009, methodology): “The tree topology was checked by the neighbour-joining algorithm and the minimum evolution method ( Kumar et al., 2004 ).”
• Abundance and community structure of ammonia-oxidizing archaea and bacteria in an acid paddy soil (2011, background): “In the last few years, the traditional view of ammonia oxidation has been changed by the discovery of the amoA gene associated with the domain archaea (Venter et al. 2004; Konneke et al. 2005; Treusch et al. 2005), suggesting that ammonia-oxidizing archaea (AOA) may be another group of ammonia oxi”
• Revising the nitrogen cycle in the Peruvian oxygen minimum zone (2009, methodology): “determined as net (15)NO2 production in the (15)NO3 and (15)NH4 (14)NO2 incubations, respectively, measured after conversion to N2 (13) or N2O (30).”
• Anammox bacteria: from discovery to application (2008, background): “How do anammox organisms interact with denitrifiers? What is the role of organic compounds in this process? And, how do anammox organisms interact with nitrifiers and dissimilatory nitrate reducers? Recently Lam et al”