Duplicated coding sequence in the waxy allele of tropical glutinous rice (Oryza sativa L.)

By S. Wanchana, T. Toojinda, S. Tragoonrung, Apichart Vanavichit. 2003

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Archaeogenetic study of prehistoric rice remains from Thailand and India: evidence of early japonica in South and Southeast Asia (2016, background): “Nuclear markers also hold the potential to assess directly the presence or absence of key functional alleles, for agronomic traits or domestication traits, such as seed shattering (qsh1, sh4), seed width (qsw5), seed pericarp colour (rc), waxy (wx) and plant height (sd1) (Konishi et al. 2006; Lin et”
Waxy gene haplotypes: Associations with apparent amylose content and the effect by the environment in an international rice germplasm collection (2008, background): “Even though the haplotype In1T-Ex6A was associated with the low AAC-type and the haplotype In1T-Ex6C was found only in glutinous rice in this collection, sequence analysis has demonstrated that the glutinous rice contained a pre-mature termination codon in waxy gene (Wanchana et al., 2003).”