The Origins of Genome Architecture

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Genome evolution in fungal plant pathogens: looking beyond the two-speed genome model (2020, unknown): “TE-rich compartmentalized genomes are commonly observed in nature (Lynch, 2007) and their maintenance (e.g. replication and transcription) could be evolutionary costly (Bennetzen and Wang, 2014; Oliver and Greene, 2009; Schrader and Schmitz, 2019), and thus it is conceivable that TE-rich…”
Teleost fish with specific genome duplication as unique models of vertebrate evolution (2010, background): “Such genes may be a potential driving force for genomic incompatibility and post-zygotic isolation (Lynch 2007).”
Nothing in Genetics Makes Sense Except in Light of Genomic Conflict (2013, background): “In addition, genomes were found to be populated with a wide diversity of active parasitic TEs that contributed importantly to the mutation process, reproductive incompatibilities, and ectopic recombination leading to aneuploid gametes (reviewed by Lynch 2007).”