Nextclade: clade assignment, mutation calling and quality control for viral genomes

By Ivan Aksamentov, Cornelius Roemer, Emma B. Hodcroft, Richard A. Neher. Journal of Open Source Software, 2021

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View Paper: https://www.semanticscholar.org/paper/14f423b6cb88ee6bddb7ce1f58e0d902a75a4a02