Horizontal and vertical complexity of attached and free‐living bacteria of the eastern Mediterranean Sea, determined by 16S rDNA and 16S rRNA fingerprints

By M. M. Moeseneder, Christian Winter, G. Herndl. 2001

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Citations in the corpus

The Biodiversity of the Mediterranean Sea: Estimates, Patterns, and Threats (2010, background): “, 137], free-living communities appear to be as complex as epipelagic communities [138], and appear to vary seasonally, as do surface communities [139].”
Spatial and temporal scales of variation in bacterioplankton community structure in the NW Mediterranean Sea (2005, background): “Variability with depth has been shown to be more marked in marine ecosystems, where changes in community structure are driven by the vertical stratification of waters (Lee & Fuhrman 1991, Murray et al. 1996, 1998, Acinas et al. 1997, Moeseneder et al. 2001).”
Water residence time: A regulatory factor of the DOM to POM transfer efficiency (2007, background): “This process could lead to the dissolution of aggregates (Smith et al. 1992), to a modification of the composition of the attached bacterial assemblages (Moeseneder et al. 2001), and to a modification of its chemical composition by selectively removing bioreactive components (Aluwihare”
Archaeal uptake of enantiomeric amino acids in the meso‐ and bathypelagic waters of the North Atlantic (2006, background): “Major shifts in the prokaryotic community composition between surface and mesopelagic waters support this hypothesis (Karner et al. 2001; Moeseneder et al. 2001).”
Microbial ecology of organic aggregates in aquatic ecosystems (2002, background): “A high diversity was found on marine snow with dominant phylotypes of the Cytophaga/Flavobacteria cluster, and αand γ-Proteobacteria (DeLong et al. 1993, Rath et al. 1998, Moeseneder et al. 2001).”
Mesopelagic zone ecology and biogeochemistry - a synthesis (2010, background): “…bacterial assemblages reveal distinct bacterial communities associated with the two types of environment (DeLong et al., (1993); Rath et al., 1998; Moeseneder et al., 2001), while other molecular fingerprinting studies support the ‘generalist’ hypothesis in which a large proportion of similar…”
Response of bacterioplankton to iron fertilization in the Southern Ocean (2004, methodology): “16S rDNA fingerprinting of bacterial communities—Terminal-restriction fragment length polymorphism (T-RFLP) analysis of bacterial communities was performed by methods previously described (Moeseneder et al. 2001b).”
Emerging concepts on microbial processes in the bathypelagic ocean-ecology, biogeochemistry, and genomics (2010, background): “In deep waters of the eastern Mediterranean Sea, Moeseneder et al. (2001) found that community composition and stratification patterns of free-living prokaryotes differed from those of particle-associated prokaryotes; the two communities shared only a limited number of phylotypes.”
Major shift in bacterioplankton utilization of enantiomeric amino acids between surface waters and the ocean's interior (2003, background): “Major shifts in the bacterial community composition between surface and mesopelagic waters have been reported by Moeseneder et al. (2001) for the Mediterranean Sea.”
Temporal and spatial response of bacterioplankton lineages to annual convective overturn at the Bermuda Atlantic Time‐series Study site (2005, methodology): “For example, Moeseneder et al. (2001) used T-RFLP to compare attached and free-living bacterial communities of the eastern Mediterranean Sea, while González and coworkers (2000) used this method to fingerprint bacterioplankton communities associated with an eddy-induced oceanic algal bloom in the…”
Disentangling the spatial patterns in community composition of prokaryotic and eukaryotic lake plankton (2011, methodology): “We used the limit of 2 bp for all fragment sizes (Moeseneder et al. 2001).”
Microbial Surface Colonization and Biofilm Development in Marine Environments (2015, background): “The distinct temperature optima of the transient deepwater surfaceassociated and resident free-living microorganisms provide a reasonable explanation for findings of limited species exchange between particle-associated and free-living microbial communities throughout the water column (104, 128, 199)”
Temporal and spatial scales of variation in bacterioplankton assemblages of oligotrophic surface waters (2006, background): “Vertical changes occur on much smaller scales, as is typical of the stratified ocean (Moeseneder et al. 2001).”