MyriMatch: highly accurate tandem mass spectral peptide identification by multivariate hypergeometric analysis.
By David L. Tabb, C. Fernando, Matthew Chambers. Journal of Proteome Research, 2007
577 citations recorded by the source corpus.
Subfields: Molecular Biology, Spectroscopy
View Paper: https://www.semanticscholar.org/paper/07daee8d7a9dc6a3312594ff610d22885d12672f
How researchers see this paper
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In Molecular Biology
- Alexey I. Nesvizhskii
- R. Aebersold
- Eric W. Deutsch
- Jimmy K. Eng
- Zhi Sun
- Luis Mendoza
- David D. Shteynberg
- Rob Moritz
In Spectroscopy
- Alexey I. Nesvizhskii
- R. Aebersold
- Eric W. Deutsch
- Jimmy K. Eng
- Zhi Sun
- Luis Mendoza
- David D. Shteynberg
- Rob Moritz
Citations in the corpus
- 2016 update of the PRIDE database and its related tools (2015, background): “4), ProteinPilot (AB SCIEX), PEAKS (Bioinformatics Solutions Inc), Scaffold (Proteome Software), MyriMatch (43) and PeptideShaker (44) and recently X!Tandem (from the PILEDRIVER version) (45).”
- mzML—a Community Standard for Mass Spectrometry Data (2010, background): “Tandem (29), Myrimatch (30), the Trans-Proteomic Pipeline (TPP) (31–33), and the Proteios Software Environment (34).”
- A Guided Tour of the Trans-Proteomic Pipeline (2010, methodology): “We have preliminary beta support for some additional search engines such as InsPecT [47] and MyriMatch [48] with support for more search engines planned, as well as support for additional quantitative labeling techniques.”
- A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics (2010, unknown): “[277] Tabb DL, Fernando CG, Chambers MC.”
- iProphet: Multi-level Integrative Analysis of Shotgun Proteomic Data Improves Peptide and Protein Identification Rates and Error Estimates* (2011, background): “Beta support exists for Phenyx (42), Inspect (29), MyriMatch (30), and OMSSA (31).”
- Spectral Probabilities and Generating Functions of Tandem Mass Spectra: a Strike Against Decoy Databases (2008, methodology): “, SEQUEST or tools using sequence-specific peak intensities [43,44,45]) have non-additive scoring components and thus cannot be modeled by this generating function framework.”