Cellular-resolution connectomics: challenges of dense neural circuit reconstruction

By Moritz Helmstaedter. Nature Methods, 2013

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A Discriminatively Trained Fully Connected Conditional Random Field Model for Blood Vessel Segmentation in Fundus Images (2017, background): “This property can potentially contribute to a number of different biological and medical applications where the segmentation of such structures is required, including automatic plant root phenotyping [34] or neuron analysis [35].”
RNA design rules from a massive open laboratory (2014, background): “Other fields, such as taxonomy (31), astronomy (13), and neural mapping (32), are making pioneering efforts in internet-scale scientific discovery games.”
A Complete Electron Microscopy Volume of the Brain of Adult Drosophila melanogaster (2017, background): “However, generating EM volumes of any appreciable size is technically challenging (Briggman and Bock, 2012; Harris et al., 2006; Helmstaedter, 2013).”