Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes

By Michele Morgante, M. Hanafey, W. Powell. Nature Genetics, 2002

1,163 citations recorded by the source corpus.

Subfields: Genetics, Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/02c5ea7ba9e4e0ba83dff3c5204fc4e4f65c1ef4

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Citations in the corpus

Microsatellites: genomic distribution, putative functions and mutational mechanisms: a review (2002, background): “Morgante et al. (2002) provided evidence of positive selection for specific repeats in the transcribed regions by examining whether complementary motifs were equally represented in the transcribed strand in the Arabidopsis thaliana genome, and suggested that very different selective pressures seem…”
Microsatellites and their genomic distribution, evolution, function and applications : A review with special reference to fish genetics (2006, background): “In contrast to other types of repeat motifs, triplets are found in both coding and non-coding genomic regions with a high frequency (Wren et al., 2000; Morgante et al., 2002).”
Genetic stability of three economically important micropropagated banana (Musa spp.) cultivars of lower Indo-Gangetic plains, as assessed by RAPD and ISSR markers (2006, background): “However this type of repeat is less abundant in plant genomes compared to other kind of repeats (Morgante et al., 2002).”
SSR Analysis of Soybean ('Glycine max' (L.) Merr.) Genetic Relationship and Variety Identification in Thailand (2011, background): “…produce the highest polymorphisms compared to RFLPs, AFLPs and RAPDs, and have much greater ability to identify unique alleles in elite and PI soybean germplasm than other marker systems (Maughan et al., 1996; Narvel et al., 2000a; Morgante et al., 2002; Seitova et al., 2004; Wang et al., 2006a).”
An overview of molecular marker methods for plants (2006, background): “…primarily on monocotyledonous crops (Kantety et al., 2002; Thiel et al., 2003; Varshney et al., 2002), although ESTs of a few dicot species have been explored for SSR mining (Eujayl et al. 2004; Morgante et al. 2002; Qureshi et al. 2004; Saha et al. 2003; Scott et al., 2000; Varshney et al., 2005).”
SSR-based genetic diversity assessment among Tunisian winter barley and relationship with morphological traits (2004, background): “Moreover the fact that microsatellite sequences were shown to be more frequent in transcribed regions (Morgante et al., 2002) and that microsatellite markers are under the influence of natural selection in barley and wheat (Saghai-Maroof et al., 1994; Stachel et al., 2000) constitutes the advantage…”
DNA molecular markers in plant breeding: current status and recent advancements in genomic selection and genome editing (2018, background): “Studies have also confirmed the presence of SSRs in protein-coding genes and expressed sequence tags (ESTs) [32].”
Microsatellite markers: an overview of the recent progress in plants (2011, background): “…of microsatellites is inversely related to the genome size in plants, but the percentage of repetitive DNA appeared to remain constant in coding regions (Morgante et al. 2002) with dicots having more mononucleotide repeats and monocots having more trinucleotide repeats (Lawson and Zhang 2006).”
Molecular markers: It’s application in crop improvement (2009, background): “The strengths of microsatellites include the codominance of alleles, high genomic abundance, and random distribution throughout the genome (Morgante et al. 2002).”
Spatial Distribution of Genetic Variation in a Natural Beech Stand (Fagus sylvaticaL.) Based on Microsatellite Markers (2004, background): “Morgante et al. (2002) found that microsatellites are abundant in transcribed and other singlecopy regions of plant genomes.”
Conservation of plant genetic resources by cryopreservation. (2011, background): “Microsatellites include low copy regions of plant genomes (Morgante et al., 2002).”